BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D05LP1|AL426677
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig676 1618 0.0
>3x_Contig676
Length = 2200
Score = 1618 bits (816), Expect = 0.0
Identities = 819/820 (99%)
Strand = Plus / Plus
Query: 1 acctattgaggggtcaccatcgttgggtggtaccaaatccgatctgtttggaggactaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 acctattgaggggtcaccatcgttgggtggtaccaaatccgatctgtttggaggactaag 91
Query: 61 tgcgaacgcgaagaacgatgatgcatcaggtacgattatgccgaagatgcctgatcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tgcgaacgcgaagaacgatgatgcatcaggtacgattatgccgaagatgcctgatcagga 151
Query: 121 ggcgaaaaaggctttggggcgggcttcatggaaatatttccacactcttttagccagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ggcgaaaaaggctttggggcgggcttcatggaaatatttccacactcttttagccagatt 211
Query: 181 tcccgacgagcctacagagcaagagaaaacgaaactacgtgaatttctttacctatatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tcccgacgagcctacagagcaagagaaaacgaaactacgtgaatttctttacctatatgc 271
Query: 241 ggagttatatccatgtggcgaatgttcttaccatttcgtcaagatgttgaagaaataccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggagttatatccatgtggcgaatgttcttaccatttcgtcaagatgttgaagaaataccc 331
Query: 301 accacaagtagccagtagaaccactgctgctttatggggctgtcatattcataatctagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 accacaagtagccagtagaaccactgctgctttatggggctgtcatattcataatctagt 391
Query: 361 gaacgatcatcttgaaaaaccaaggtacgattgtaacacaatcttagaagattacgactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaacgatcatcttgaaaaaccaaggtacgattgtaacacaatcttagaagattacgactg 451
Query: 421 tggatgcactgacgagaacggtaatatcgatccatctttgaaaatgaacaaagtaacgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tggatgcactgacgagaacggtaatatcgatccatctttgaaaatgaacaaagtaacgtt 511
Query: 481 gaacaaagaggagaaacaattgggatgaagtgagggaatcgtttaccctccgtatgtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaacaaagaggagaaacaattgggatgaagtgagggaatcgtttaccctccgtatgtgtc 571
Query: 541 aattgaaagaataagatctaatattgttgcattcgcatttcgttttatctaaatatatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aattgaaagaataagatctaatattgttgcattcgcatttcgttttatctaaatatatat 631
Query: 601 gtaactaataagcatagagagtatacggcagccatatttttatcatcacattatggtaca 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 632 gtaactaataagcatagagagtatacggcagcaatatttttatcatcacattatggtaca 691
Query: 661 acaggcactcgtttcctcgtgagatctagcaaaattgttcttcctcatagtattattata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acaggcactcgtttcctcgtgagatctagcaaaattgttcttcctcatagtattattata 751
Query: 721 tgggttttcaccaaccattgggtaaccccatacttctggaacagcgtaatccttatgggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tgggttttcaccaaccattgggtaaccccatacttctggaacagcgtaatccttatgggt 811
Query: 781 tgaggtatagtcgattatggacaaacaagcatttgacgca 820
||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tgaggtatagtcgattatggacaaacaagcatttgacgca 851
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6218
Number of Sequences: 1807
Number of extensions: 6218
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)